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journal articles || letters/reviews || phd thesis || technical reports

Journal articles

  1. Lindquist K, Sen S, Cauley JA, Ferrell RE, Penninx B, Harris T, Li R, Cummings SR, Yaffe K "Estrogen receptor genotype and risk of cognitive impairment in elders: Findings from the Health ABC study," Neurobiology of Aging, in press.
  2. Ku T-S, Kane CJ, Sen S, Henderson WG, Dudley RA, Cason BA (2008) "Effects of hospital procedure volume and resident training on clinical outcomes and resource use in radical retropubic prostatectomy surgery in the Department of Veterans Affairs," Journal of Urology, 179:272-278.
  3. Manichaikul A, Palmer AA, Sen S, Broman KW (2007) "Significance thresholds for quantitative trait locus mapping under selective genotyping," Genetics, 177:1963-1966.
  4. Folayan M, Owotade F, Adejuyigbe E, Sen S, Lawal B, Ndukwe K (2007) "The timing of eruption of the primary dentition in Nigerian children," American Journal of Physical Anthropology, 134:443-448.
  5. Chen T, Bertenthal D, Sahay A, Sen S, Chren MM (2007) "Predictors of skin-related quality of life after treatment of cutaneous basal cell carcinoma and squamous cell carcinoma," Archives of Dermatology, 143:1386-1392.
  6. Moody-Ayers S, Lindquist K, Sen S, Covinsky KE (2007) "Childhood Social and Economic Well-Being and Health in Older Age," American Journal of Epidemiology, 166:1059-1067.
  7. Cascio M, Xing Y, Gong D, Popovich J, Eger EI, Sen S, Peltz G, Sonner JM (2007) "Mouse chromosome 7 harbors a quantitative trait locus for isoflurane minimum alveolar concentration," Anesthesia and Analgesia, 105:381-385.
  8. Chren MM, Sahay AP, Bertenthal D, Sen S, Landefeld CS (2007) "Quality-of-life outcomes of treatments for cutaneous basal cell carcinoma and squamous cell carcinoma," Journal of Investigative Dermatology, 127:1351-57.
  9. Satagopan JM, Sen S, Churchill GA (2007) "Sequential quantitative trait locus mapping in experimental crosses," Statistical Applications in Genetics and Molecular Biology, 6:Article12.
  10. Sen S, Satagopan JM, Broman, KW, and Churchill GA (2007) "R/qtlDesign: Inbred line cross experimental design," Mammalian Genome, 18:87-93.
    Preprint | R/qtlDesign software
  11. Rodriguez RA, Sen S, Mehta K, Moody-Ayers S, Bacchetti P, O'Hare AM (2007) "Geography Matters: Residential segregation by race and outcomes among metropolitan dialysis patients and facilities," Annals of Internal Medicine, 146:493-501.
  12. Seal KH, Bertenthal D, Miner CR, Sen S, Marmar C (2007) "Bringing the war back home: Mental health disorders among 103,788 US veterans returning from Iraq and Afghanistan seen at VA facilities," Archives of Internal Medicine, 167:476-482.
  13. Holroyd-Leduc JM, Sen S, Bertenthal D, Sands LP, Palmer RM, Kresevic DM, Covinsky KE, Landefeld CS (2007) "The relationship of indwelling urinary catheters to death, length of hospital stay, functional decline, and nursing home admission in hospitalized older medical patients," Journal of the American Geriatric Society, 55:227-233.
  14. Steinman MA, Rosenthal GE, Landefeld CS, Bertenthal D, Sen S, Kaboli PJ (2007) "Conflicts and Concordance Between Measures of Medication Prescribing Quality," Medical Care, 45:95-99.
  15. Broman KW, Sen S, Owens SE, Manichaikul A, Southard-Smith EM, Churchill GA (2006) "The X chromosome in quantitative trait locus mapping," Genetics, 174:2151-2158.
  16. O'Hare AM, Bertenthal D, Covinsky KE, Landefeld CS, Sen S, Mehta K, Steinman MA, Borzecki A, Walter LC (2006) "Mortality risk stratification in chronic kidney disease: One size for all ages?" Journal of the American Society of Nephrology, 7:846-853.
  17. O'Hare AM, Bertenthal D, Sidawy AN, Shlipak MG, Sen S, Chren MM (2006) "Renal insufficiency and use of revascularization among a national cohort of men with advanced lower extremity peripheral arterial disease," Clinical Journal of the American Society of Nephrology, 1:297-304.
  18. Ruo B, Bertenthal D, Sen S, Bittner V, Ireland CC, Hlatky MA (2006) "Self-rated health among women with coronary disease: Depression is as important as recent cardiovascular events," American Heart Journal, 152:Article921.e1.
  19. Steinman MA, Landefeld CS, Rosenthal GE, Berthenthal D, Sen S, Kaboli PJ (2006) "Polypharmacy and prescribing quality in older people," Journal of the American Geriatric Society 54:1516-1523.
  20. Manichaikul A, Dupuis J, Sen S, Broman KW (2006) "Poor performance of bootstrap confidence intervals for the location of a quantitative trait locus," Genetics, 174:481-489.
  21. Wetmore JB, Johansen KL, Sen S, Hung AM, Lovett DH (2006) "An angiotensin converting enzyme haplotype predicts survival in patients with end stage renal disease," Human Genetics, 120:201-210.
  22. Hoopes RR, Middleton FA, Sen S, Hueber PA, Reid R, Bushinsky DA, Scheinman SJ (2006) "Isolation and confirmation of calcium excretion QTL on chromosome 1 in GHS congenic rats", Journal of the American Society of Nephrology, 17:1292-1304.
  23. Collin GB, Maddatu TP, Sen S, and Naggert JK (2005) "Genetic modifiers interact with Cpefat to affect body weight, adiposity, and hyperglycemia," Physiological Genomics, 22:182-190.
  24. Juenger TE, McKay JK, Hausmann N, Keurentjes J, Sen S, Stowe KA, Dawson TE, Simms EL, Richards JH (2005) "Identification and characterization of QTL underlying whole-plant physiology in Arabidopsis thaliana: &delta13C, stomatal conductance, and transpiration efficiency," Plant, Cell, and the Environment, 28:697-708.
  25. Wetmore JB, Hung AM, Lovett DH, Sen S, Quershy O, Johansen KL (2005) "Interleukin-1 gene cluster polymorphisms predict risk of ESRD," Kidney International, 68:278-284.
  26. Sen S, Satagopan JM, and Churchill GA (2005) "Quantitative trait locus study design from an information perspective," Genetics, 170:447-464.
    PDF | Supplementary Information
  27. Juenger TE, Sen S, Stowe KA, Simms EL (2005) "Epistasis and genotype-environment interaction for quantitative trait loci affecting flowering time in Arabidopsis thaliana," Genetica, 123:87-105.
  28. O'Hare AM, Bertenthal D, Shlipak MG, Sen S, Chren MM (2005) "Impact of renal insufficiency on mortality in advanced lower extremity peripheral arterial disease," Journal of the American Society of Nephrology,16:514-519.
  29. Hausmann N, Juenger TE, Sen S, Stowe KA, Dawson TE, Simms EL (2005) "Quantitative trait loci (QTL) affecting &delta13C and response to differential water availability in Arabidopsis thaliana," Evolution, 59:81-96.
  30. Lustig RH, Sen S, Soberman JE, Velasquez-Mieyer PA (2004) "Obesity, leptin resistance, and the effects of insulin reduction," International Journal of Obesity, 28:1344-1348.
  31. Korstanje R, Eriksson P, Samnegard A, Olsson PG, Forsman-Semb K, Sen S, Churchill GA, Rollins J, Harris S, Hamsten A, Paigen B (2004) "Locating Ath8, a locus for murine atherosclerosis susceptibility and testing several of its candidate genes in mice and humans," Atherosclerosis, 177:443-50.
  32. Bouxsein ML, Uchiyama T, Rosen CJ, Schultz KL, Donahue LR, Turner CH, Sen S, Churchill GA, Muller R, Beamer WG (2004) "Mapping quantitative trait loci for vertebral trabecular bone volume fraction and microarchitecture in mice," Journal of Bone and Mineral Research, 19:587-99.
  33. Hoopes RR, Reid R, Sen S, Szpirer C, Dixon P, Pannet A, Thakker RV, Bushinsky DA, Scheinman SJ. (2003) "Quantitative trait loci for hypercalciuria in a rat model of kidney stone disease," Journal of the American Society of Nephrology,14:1844-1850.
  34. Broman KW, Wu H, Sen S, Churchill GA (2003) "R/qtl: QTL mapping in experimental crosses," Bioinformatics,19:889-890.
    R/qtl software
  35. Ormoneit D and Sen S (2002), "Kernel-based reinforcement learning," Machine Learning; 49:161-178. PDF
  36. Sen S and Churchill GA (2001), "A statistical framework for quantitative trait mapping"; Genetics; 159:371-387.
    PDF | Pseudomarker software | QTL Archive
  37. Kim JH, Sen S, Avery CS, Simpson EM, Churchill GA, Nishina PM, and Naggert JK (2001), "Genetic analysis of a new mouse model for non-insulin-dependent diabetes"; Genomics; 74:273-286.
  38. Beamer WG, Shultz KL, Donahue LR, Churchill GA, Sen S, Wergedal JR, Baylink DJ, and Rosen CJ (2001), "Quantitative trait loci for femoral and lumbar vertebral bone mineral density in C57BL/6J and C3H/HeJ inbred strains of mice"; Journal of Bone and Mineral Research; 16:1195-1206.
  39. Dighe A and Sen S (1999), "Information content in B->VV decays and the angular moments method," Physical Review D; 59:074002. PDF
  40. Vijayakumar S, Quadri F, Sen S, Vaida F, Ignacio L, Weichselbaum R (1995) "Measurement of Weekly Prostate Specific Antigen Levels in Patients Receiving Pelvic Radiotherapy for Nonprostatic Malignancies," International Journal of Radiation Oncology and Biological Physics, 32:189-195.

Letters and Reviews

  1. Ku T-S, Kane CJ, Sen S, Henderson WG, Dudley RA, Cason BA (2008) "Effects of hospital procedure volume and resident training on clinical outcomes and resource use in radical retropubic prostatectomy surgery in the Department of Veterans Affairs - Reply by authors," Journal of Urology, 179:279-279.
  2. Steinman MA, Landefeld CS, Rosenthal GE, Bertenthal D, Sen S, Kaboli PJ (2007) "Does the number of coexisting chronic diseases affect the adverse association between polypharmacy and prescribing quality in older adults? Response," Journal of the American Geriatrics Society, 55:803:804.
  3. Sen S, Ferdig M (2004) "QTL analysis for discovery of genes involved in drug responses," Current Drug Targets Infectious Disorders, 4:53-63.

Phd Thesis

Technical reports

  1. Sen S (2001), "A note on the mating scheme used by the Mutagenesis Project" (June 1, 2001). Center for Bioinformatics & Molecular Biostatistics. Paper mating. http://repositories.cdlib.org/cbmb/mating
  2. Sen S and Seburn K (2000), "An algorithm for detecting phenotypic mutants for the JAX neuroscience mutagenesis facility," (June 1, 2000) Center for Bioinformatics & Molecular Biostatistics. Paper mutant_mouse. http://repositories.cdlib.org/cbmb/mutant_mouse

...last updated 15 april 2008...