Home - Presentation - SFGH

Shared Microarray Facility Workshop on

Exploratory Microarray Data Analysis

 

Yee Hwa Yang and members of the core facility

SFGH, UCSF

Lectures + Labs

Lecture 1      Image analysis: acquiring data from your slide. [PDF]

Lecture 2      Assessing microarray data quality.  [PDF]

Lecture 3      Introduction to Affymetrix pre-processing. [PDF]  

Lecture 4     Two sample analysis and simple clustering microarray data. [PDF]

Lecture 5     Linear models for microarrays.

Lecture 6     Discrimination in microarray experiments. [PDF]

Lecture 7     Annotations and database with Acuity. [PDF]

Lab A            Hands-on lab with Acuity [Word Doc][PDF]

                       Data can be downloaded from here [zip file]

Evaluation [PDF]

References

bullet Gordon Smyth's web site
bulletLeung Yuk Fai's References

 

Last Updated: 2004/03/08 10:05